Publications

@article{chen2018quantitative,

title = {Quantitative differential phase contrast (DPC) microscopy with computational aberration correction},

author = { Michael Chen and Zachary F Phillips and Laura Waller},

url = {https://doi.org/10.1364/OE.26.032888},

doi = {10.1364/OE.26.032888},

year  = {2018},

date = {2018-11-30},

journal = {Optics express},

volume = {26},

number = {25},

pages = {32888--32899},

publisher = {Optical Society of America},

keywords = {aberrations, DPC, LED array, phase imaging, self-calibration},

pubstate = {published},

tppubtype = {article}

}

@article{kellman2018motionb,

title = {Motion-resolved quantitative phase imaging},

author = { Michael Kellman and Michael Chen and Zachary F Phillips and Michael Lustig and Laura Waller},

url = {https://doi.org/10.1364/BOE.9.005456},

doi = {10.1364/BOE.9.005456},

year  = {2018},

date = {2018-10-15},

journal = {Biomedical optics express},

volume = {9},

number = {11},

pages = {5456--5466},

publisher = {Optical Society of America},

keywords = {algorithm, high throughput, phase imaging},

pubstate = {published},

tppubtype = {article}

}

@article{deng2018all,

title = {All-Silicon Broadband Ultraviolet Metasurfaces},

author = { Yang Deng and Xi Wang and Zilun Gong and Kaichen Dong and Shuai Lou and Nicolas C Pégard and Kyle B Tom and Fuyi Yang and Zheng You and Laura Waller and Jie Yao},

url = {https://doi.org/10.1002/adma.201802632},

doi = {10.1002/adma.201802632},

year  = {2018},

date = {2018-08-10},

journal = {Advanced Materials},

volume = {30},

number = {38},

pages = {1802632},

keywords = {metasurfaces},

pubstate = {published},

tppubtype = {article}

}

@article{gunjala2018aberration,

title = {Aberration recovery by imaging a weak diffuser},

author = { Gautam Gunjala and Stuart Sherwin and Aamod Shanker and Laura Waller},

url = {https://doi.org/10.1364/OE.26.021054},

doi = {10.1364/OE.26.021054},

year  = {2018},

date = {2018-08-06},

journal = {Optics express},

volume = {26},

number = {16},

pages = {21054--21068},

publisher = {Optical Society of America},

keywords = {aberrations, speckle, statistical optics},

pubstate = {published},

tppubtype = {article}

}

@article{ophus2018linear,

title = {Linear and Nonlinear Reconstruction Algorithms for Atomic-Resolution Tomography Using Phase Contrast Electron Microscopy},

author = { Colin Ophus and David Ren and Michael Chen and Catherine Groschner and Mary C Scott and Laura Waller},

url = {https://doi.org/10.1017/S1431927618001046},

doi = {10.1017/S1431927618001046},

year  = {2018},

date = {2018-08-01},

journal = {Microscopy and Microanalysis},

volume = {24},

number = {S1},

pages = {110--111},

publisher = {Cambridge University Press},

keywords = {3D imaging, algorithms, phase imaging, TEM},

pubstate = {published},

tppubtype = {article}

}

@article{eckert2018efficient,

title = {Efficient illumination angle self-calibration in Fourier ptychography},

author = { Regina Eckert and Zachary F Phillips and Laura Waller},

url = {https://doi.org/10.1364/AO.57.005434},

year  = {2018},

date = {2018-06-28},

journal = {Applied Optics},

volume = {57},

number = {19},

pages = {5434--5442},

publisher = {Optical Society of America},

keywords = {algorithms, FPM, LED array, phase imaging, self-calibration},

pubstate = {published},

tppubtype = {article}

}

@article{bostan2018learning,

title = {Learning-based image reconstruction via parallel proximal algorithm},

author = { Emrah Bostan and Ulugbek S Kamilov and Laura Waller},

url = {https://doi.org/10.1109/LSP.2018.2833812},

doi = {10.1109/LSP.2018.2833812},

year  = {2018},

date = {2018-05-07},

journal = {IEEE Signal Processing Letters},

volume = {25},

number = {7},

pages = {989--993},

publisher = {IEEE},

keywords = {algorithms, fluorescence imaging, learning-based, regularization},

pubstate = {published},

tppubtype = {article}

}

@article{mardinly2018precise,

title = {Precise multimodal optical control of neural ensemble activity},

author = { Alan R Mardinly and Ian Antón Oldenburg and Nicolas C Pégard and Savitha Sridharan and Evan H Lyall and Kirill Chesnov and Stephen G Brohawn and Laura Waller and Hillel Adesnik},

url = {https://doi.org/10.1038/s41593-018-0139-8},

doi = {10.1038/s41593-018-0139-8},

year  = {2018},

date = {2018-04-30},

journal = {Nature neuroscience},

volume = {21},

number = {6},

pages = {881--893},

publisher = {Nature Publishing Group},

keywords = {3D imaging, digital holography, multiphoton, neural imaging},

pubstate = {published},

tppubtype = {article}

}

@article{antipa2018diffusercam,

title = {DiffuserCam: Lensless single-exposure 3D imaging},

author = { Nick Antipa and Grace Kuo and Reinhard Heckel and Ben Mildenhall and Emrah Bostan and Ren Ng and Laura Waller},

url = {https://doi.org/10.1364/OPTICA.5.000001},

doi = {10.1364/OPTICA.5.000001},

year  = {2018},

date = {2018-01-20},

journal = {Optica},

volume = {5},

number = {1},

pages = {1--9},

publisher = {Optical Society of America},

keywords = {compressed sensing, diffuser, lensless imaging},

pubstate = {published},

tppubtype = {article}

}

@article{10.1117/1.JMM.16.4.041012,

title = {Modeling high-efficiency extreme ultraviolet etched multilayer phase-shift masks},

author = {Stuart Sherwin and Andrew Neureuther and Patrick Naulleau},

url = {https://doi.org/10.1117/1.JMM.16.4.041012},

doi = {10.1117/1.JMM.16.4.041012},

year  = {2017},

date = {2017-12-09},

journal = {Journal of Micro/Nanolithography, MEMS, and MOEMS},

volume = {16},

number = {4},

pages = {1 -- 15},

publisher = {SPIE},

keywords = {EUV, experimental design, lithography, optical models},

pubstate = {published},

tppubtype = {article}

}

@article{pegard2017three,

title = {Three-dimensional scanless holographic optogenetics with temporal focusing (3D-SHOT)},

author = { Nicolas C Pégard and Alan R Mardinly and Ian Antón Oldenburg and Savitha Sridharan and Laura Waller and Hillel Adesnik},

url = {https://doi.org/10.1038/s41467-017-01031-3},

doi = {10.1038/s41467-017-01031-3},

year  = {2017},

date = {2017-10-31},

journal = {Nature communications},

volume = {8},

number = {1},

pages = {1--14},

publisher = {Nature Publishing Group},

keywords = {3D imaging, digital holography, fluorescence imaging, neural imaging},

pubstate = {published},

tppubtype = {article}

}

@article{liu2017seagle,

title = {SEAGLE: Sparsity-driven image reconstruction under multiple scattering},

author = { Hsiou-Yuan Liu and Dehong Liu and Hassan Mansour and Petros T Boufounos and Laura Waller and Ulugbek S Kamilov},

url = {https://doi.org/10.1109/TCI.2017.2764461},

doi = {10.1109/TCI.2017.2764461},

year  = {2017},

date = {2017-10-19},

journal = {IEEE Transactions on Computational Imaging},

volume = {4},

number = {1},

pages = {73--86},

publisher = {IEEE},

keywords = {algorithms, multiple-scattering, optical models},

pubstate = {published},

tppubtype = {article}

}

@article{zhang20173d,

title = {3D computer-generated holography by non-convex optimization},

author = { Jingzhao Zhang and Nicolas C Pégard and Jingshan Zhong and Hillel Adesnik and Laura Waller},

url = {https://doi.org/10.1364/OPTICA.4.001306},

doi = {10.1364/OPTICA.4.001306},

year  = {2017},

date = {2017-10-19},

journal = {Optica},

volume = {4},

number = {10},

pages = {1306--1313},

publisher = {Optical Society of America},

keywords = {3D imaging, algorithms, digital holography, fluorescence imaging, neural imaging},

pubstate = {published},

tppubtype = {article}

}

@article{liu2017multiplexed,

title = {Multiplexed phase-space imaging for 3D fluorescence microscopy},

author = { Hsiou-Yuan Liu and Jingshan Zhong and Laura Waller},

url = {https://doi.org/10.1364/OE.25.014986},

doi = {10.1364/OE.25.014986},

year  = {2017},

date = {2017-06-21},

journal = {Optics express},

volume = {25},

number = {13},

pages = {14986--14995},

publisher = {Optical Society of America},

keywords = {3D imaging, fluorescence imaging, phase space},

pubstate = {published},

tppubtype = {article}

}

@article{phillips2017single,

title = {Single-shot quantitative phase microscopy with color-multiplexed differential phase contrast (cDPC)},

author = { Zachary F Phillips and Michael Chen and Laura Waller},

url = { https://doi.org/10.1371/journal.pone.0171228

},

doi = {10.1371/journal.pone.0171228},

year  = {2017},

date = {2017-02-02},

journal = {PloS one},

volume = {12},

number = {2},

publisher = {Public Library of Science},

keywords = {color-multiplexed, DPC, multiplexed illumination, single-shot},

pubstate = {published},

tppubtype = {article}

}

@article{yeh2017structured,

title = {Structured illumination microscopy with unknown patterns and a statistical prior},

author = { Li-Hao Yeh and Lei Tian and Laura Waller},

url = {https://doi.org/10.1364/BOE.8.000695},

doi = {10.1364/BOE.8.000695},

year  = {2017},

date = {2017-02-01},

journal = {Biomedical optics express},

volume = {8},

number = {2},

pages = {695--711},

publisher = {Optical Society of America},

keywords = {algorithms, self-calibration, structured illumination},

pubstate = {published},

tppubtype = {article}

}

@article{chen20163d,

title = {3D differential phase contrast microscopy},

author = { Michael Chen and Lei Tian and Laura Waller},

url = {https://doi.org/10.1364/BOE.7.003940},

year  = {2016},

date = {2016-10-01},

journal = {Biomedical Optics Express},

volume = {7},

number = {10},

pages = {3940--3950},

publisher = {Optical Society of America},

keywords = {3D imaging, DPC, phase imaging},

pubstate = {published},

tppubtype = {article}

}

@article{dardikman2016video,

title = {Video-rate processing in tomographic phase microscopy of biological cells using CUDA},

author = { Gili Dardikman and Mor Habaza and Laura Waller and Natan T Shaked},

url = {https://doi.org/10.1364/OE.24.011839},

doi = {10.1364/OE.24.011839},

year  = {2016},

date = {2016-05-23},

journal = {Optics express},

volume = {24},

number = {11},

pages = {11839--11854},

publisher = {Optical Society of America},

keywords = {3D imaging, algorithms},

pubstate = {published},

tppubtype = {article}

}